Genetic Data
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TreeFit v.1.0
Software for evaluating how well a UPGMA or neighbor-joining tree fits a matrix of genetic distances Genetic data analysis made easy.Evolutionary trees are frequently used to describe genetic relationships between populations. Hierarchical,
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Migrate-n v.3.2.6
Migration rates estimation made easy. Migrate-n can estimate population parameters, impactful population sizes and migration rates of n populations, using genetic data.
BEAGLE v.3.3.2
Large-scale genetic data sets analysis made easy. BEAGLE is a state of the art program package for analysis of large-scale genetic data sets with hundreds of thousands of markers genotyped on thousands of samples. BEAGLE can 1. phase genotype data
BayeScan v.2.01
Analyze genetic data with this tool. BayeScan help you identify candidate loci under natural selection from genetic data, using differences in allele frequencies between populations. BayeScan is based on the multinomial-Dirichlet model. One of the
LDhat v.2.2
LDhat is a package written in the C language for the analysis of recombination rates from population genetic data.
FinchTV v.1 4
With over 60,000 downloads to date, Geospiza's FinchTV is the popular way to view DNA sequence traces on Linux, Mac OSX, Windows, and Solaris.
SIMCOAL v.1.0
Simulate molecular genetic diversity with the help of this tool. SIMCOAL is a computer software for the simulation of molecular genetic diversity in an arbitrary number of haploid populations examined for a set of fully linked loci.
TreesimJ v.0.7.1
TreesimJ is a flexible, individual-based population genetic simulator. It tracks the state of a population evolving in forward time via discrete, Wright-Fisher generations.
AquaSplatche v.1.0
AquaSplatche is a software to simulate genetic diversity based on a realistic vectorized environment. Simulate genetic diversity with this tool.Classical models of structured populations do not apply well to populations of freshwater fishes,
SRNA Workbench 2.5.0 Beta v.1.0
RNA silencing is a complex, highly-conserved, transcriptional and post-transcriptional mechanism that tunes gene expression.